Lars Martin Jakt
Researcher
Faculty of Biosciences and Aquaculture
2022
Exploring the potential of mRNA for taxonomic delineation of marine benthic eukaryotes 2022, Marine Genomics: Volum 62;Mailli, Amalia Aikaterini; Jakt, Lars Martin; Reiss, Henning; Kopp, Martina Elisabeth Luise; Moum, Truls Borg
Intron size minimisation in teleosts 2022, BMC Genomics: Volum 23;Jakt, Lars Martin; Dubin, Arseny; Johansen, Steinar Daae
2019
The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019, BMC Research Notes: Volum 12;Dubin, Arseny; Jørgensen, Tor Erik; Jakt, Lars Martin; Johansen, Steinar Daae
Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic acid. 2019, PLOS ONE: Volum 14;Adam, Anne-Catrin; Lie, Kai Kristoffer; Whatmore, Paul; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Complete loss of the MHC II pathway in an anglerfish, Lophius piscatorius 2019, Biology Letters: Volum 15 s. 1-6;Dubin, Arseny; Jørgensen, Tor Erik; Moum, Truls Borg; Johansen, Steinar Daae; Jakt, Lars Martin
2018
Parental micronutrient deficiency distorts liver DNA methylation and expression of lipid genes associated with a fatty-liver-like phenotype in offspring 2018, Scientific Reports: Volum 8;Skjærven, Kaja Helvik; Jakt, Lars Martin; Fernandes, Jorge Manuel de Oliveira; Dahl, John Arne; Adam, Anne-Catrin; Klughammer, Johanna
Early hematopoietic and vascular development in the chick 2018, International Journal of Developmental Biology: Volum 62 s. 137-144;Nagai, Hiroki; Shin, Masahiro; Weng, Wei; Nakazawa, Fumie; Jakt, Lars Martin; Alev, Cantas
A mitochondrial long noncoding RNA in atlantic cod harbors complex heteroplasmic tandem repeat motifs 2018, Mitochondrial DNA. Part A, DNA Mapping, Sequencing, and Analysis: s. 1-6;Jørgensen, Tor Erik; Karlsen, Bård Ove; Emblem, Åse; Jakt, Lars Martin; Nordeide, Jarle Tryti; Moum, Truls Borg
Mitochondrial genome variation of Atlantic cod 2018, BMC Research Notes: Volum 11:397 s. 1-7;Jørgensen, Tor Erik; Karlsen, Bård Ove; Emblem, Åse; Breines, Ragna; Andreassen, morten; Rounge, Trine Ballestad
2016
Parental vitamin deficiency affects the embryonic gene expression of immune-, lipid transport-and apolipoprotein genes 2016, Scientific Reports: Volum 6;Skjærven, Kaja Helvik; Jakt, Lars Martin; Dahl, John Arne; Espe, Marit; Aanes, Håvard; Hamre, Kristin
2014
Longitudinal Analysis of DNA Methylation in CD34+ Hematopoietic Progenitors in Myelodysplastic Syndrome 2014, Stem Cells Translational Medicine: Volum 3 s. 1188-1198;Wong, Yan-fung; Micklem, Chris N.; Taguchi, Masataka; Itonaga, Hidehiro; Sawayama, Yasushi; Imanishi, Daisuke
2013
Epigenetic regulation of the neuroblastoma genes, Arid3b and Mycn 2013, Oncogene: Volum 32 s. 2640-2648;Kobayashi, K; Jakt, Lars Martin; Nishikawa, Shinichi
A competitive protein interaction network buffers Oct4-mediated differentiation to promote pluripotency in embryonic stem cells 2013, Molecular Systems Biology: Volum 9 s. 694;Descalzo, Silvia Munoz; Rue, Pau; Faunes, Fernando; Hayward, Penelope; Jakt, Lars Martin; Balayo, Tina
A continuum of transcriptional identities visualized by combinatorial fluorescent in situ hybridization 2013, Development: Volum 140 s. 216-225;Jakt, Lars Martin; Moriwaki, Satoko; Nishikawa, Shinichi
DNA Methylation Restricts Lineage-specific Functions of Transcription Factor Gata4 during Embryonic Stem Cell Differentiation 2013, PLoS Genetics: Volum 9;Oda, Masaaki; Kumaki, Yuichi; Shigeta, Masaki; Jakt, Lars Martin; Matsuoka, Chisa; Yamagiwa, Akiko
Prolonged Treatment with DNMT Inhibitors Induces Distinct Effects in Promoters and Gene-Bodies 2013, PLOS ONE: Volum 8;Wong, Yan-fung; Jakt, Lars Martin; Nishikawa, Shinichi
2012
Arhgef15 Promotes Retinal Angiogenesis by Mediating VEGF-Induced Cdc42 Activation and Potentiating RhoJ Inactivation in Endothelial Cells 2012, PLOS ONE: Volum 7;Kusuhara, Sentaro; Fukushima, Yoko; Fukuhara, Shigetomo; Jakt, Lars Martin; Okada, Mitsuhiro; Shimizu, Yuri
2011
Identification of region-specific genes in the early chicken endoderm 2011, Gene Expression Patterns: Volum 11 s. 171-180;Kimura, Wataru; Alev, Cantas; Sheng, Guojun; Jakt, Lars Martin; Yasugi, Sadao; Fukuda, Kimiko
Yolk sac endoderm is the major source of serum proteins and lipids and is involved in the regulation of vascular integrity in early chick development 2011, Developmental Dynamics: Volum 240 s. 2002-2010;Nakazawa, Fumie; Alev, Cantas; Jakt, Lars Martin; Sheng, Guojun
Etv2/ER71 induces vascular mesoderm from Flk1+PDGFRα+ primitive mesoderm 2011, Blood: Volum 118 s. 6975-6986;Kataoka, Hiroshi; Hayashi, Misato; Nakagawa, Reiko; Tanaka, Yosuke; Izumi, Naoki; Nishikawa, Satomi
Intrinsic transition of embryonic stem-cell differentiation into neural progenitors 2011, Nature: Volum 470 s. 503-509;Kamiya, Daisuke; Banno, Satoe; Sasai, Noriaki; Ohgushi, Masatoshi; Inomata, Hidehiko; Watanabe, Kiichi
2010
Secreted Frizzled Related Protein 4 Reduces Fibrosis Scar Size and Ameliorates Cardiac Function After Ischemic Injury 2010, Tissue Engineering Part A: Volum 16 s. 3329-3341;Matsushima, Kentaro; Suyama, Takashi; Takenaka, Chiemi; Nishishita, Naoki; Ikeda, Keiko; Ikada, Yoshito
Effective generation of iPS cells from CD34+ cord blood cells by inhibition of p53 2010, Experimental Hematology: Volum 38 s. 154-162;Takenaka, Chiemi; Nishishita, Naoki; Takada, Nozomi; Jakt, Lars Martin; Kawamata, Shin
Transcriptomic landscape of the primitive streak 2010, Development: Volum 137 s. 2863-2874;Alev, Cantas; Wu, Yuping; Kasukawa, Takeya; Jakt, Lars Martin; Ueda, Hiroki R.; Sheng, Guojun
2009
PBRL, a putative peripheral benzodiazepine receptor, in primitive erythropoiesis 2009, Gene Expression Patterns: Volum 9 s. 114-121;Nakazawa, Fumie; Alev, Cantas; Shin, Masahiro; Nakaya, Yukiko; Jakt, Lars Martin; Sheng, Guojun
Necdin restricts proliferation of hematopoietic stem cells during hematopoietic regeneration 2009, Blood: Volum 114 s. 4383-4392;Kubota, Yasushi; Osawa, Masatake; Jakt, Lars Martin; Yoshikawa, Kazuaki; Nishikawa, Shiniche
The novel protein kinase Vlk is essential for stromal function of mesenchymal cells 2009, Development: Volum 136 s. 2069-2079;Kinoshita, Masaki; Era, Takumi; Jakt, Lars Martin; Nishikawa, Shinichi
2008
BetaA, the major beta globin in definitive red blood cells, is present from the onset of primitive erythropoiesis in chicken 2008, Developmental Dynamics: Volum 237 s. 1193-1197;Alev, Cantas; Mclntyre, Brendan; Nagai, Hiroki; Shin, Masahiro; Shinmyozu, Kaori; Jakt, Lars Martin
Expression profiling of circulating non-red blood cells in embryonic blood 2008, BMC Developmental Biology: Volum 8 s. 21;Mclntyre, Brendan; Alev, Cantas; Tarui, Hiroshi; Jakt, Lars Martin; Sheng, Guojun
DNA chip databases, omics, and gene fishing: Commentary 2008, Cancer Science: Volum 99 s. 829-835;Jakt, Lars Martin; Nishikawa, Shinichi
2007
Isolation of cardiac cells from E8.5 yolk sac by ALCAM (CD166) expression 2007, Mechanisms of Development: Volum 124 s. 830-839;Murakami, Yoshinobu; Hirata, Hirokazu; Miyamoto, Yoshiaki; Nagahashi, Ayako; Sawa, Yoshiki; Jakt, Lars Martin
Array-based functional screening for genes that regulate vascular endothelial differentiation of Flk1-positive progenitors derived from embryonic stem cells 2007, Biochimica et Biophysica Acta: Volum 1770 s. 1085-1097;Yamauchi, Fumio; Okada, Mitsuhiro; Kato, Koichi; Jakt, Lars Martin; Iwata, Hiroo
Embryonic stem-cell culture as a tool for developmental cell biology 2007, Nature reviews. Molecular cell biology: Volum 8 s. 502-507;Nishikawa, Shinichi; Jakt, Lars Martin; Era, Takumi
2006
ARID3B Induces Malignant Transformation of Mouse Embryonic Fibroblasts and Is Strongly Associated with Malignant Neuroblastoma 2006, Cancer Research: Volum 66 s. 8331-8336;Kobayashi, Kenichiro; Era, Takumi; Takebe, Atsushi; Jakt, Lars Martin; Nishikawa, Shinichi
ALCAM (CD166) Is a Surface Marker for Early Murine Cardiomyocytes 2006, Cells Tissues Organs: Volum 184 s. 172-180;Hirata, Hirokazu; Murakami, Yoshinobu; Miyamoto, Yoshiaki; Tosaka, M.; Inoue, K.; Nagahashi, A.
Microarray analysis of PDGFRα+ populations in ES cell differentiation culture identifies genes involved in differentiation of mesoderm and mesenchyme including ARID3b that is essential for development of embryonic mesenchymal cells 2006, Developmental Biology: Volum 293 s. 25-37;Takebe, Atsushi; Era, Takumi; Okada, Mitsuhiro; Jakt, Lars Martin; Kuroda, Yoshikazu; Nishikawa, Shinichi
In Vitro Modeling of Paraxial and Lateral Mesoderm Differentiation Reveals Early Reversibility 2006, Stem Cells: Volum 24 s. 575-586;Sakurai, Hidetoshi; Era, Takumi; Jakt, Lars Martin; Okada, Matsuhiro; Nakai, Shigeru; Nishikawa, Satomi
Equivalency of Nuclear Transfer‐Derived Embryonic Stem Cells to Those Derived from Fertilized Mouse Blastocysts 2006, Stem Cells: Volum 24 s. 2023-2033;Wakayama, Sayaka; Jakt, Lars Martin; Suzuki, Masako; Araki, Ryoko; Hikichi, Takufusa; Kishigami, Satoshi
2005
Induction and monitoring of definitive and visceral endoderm differentiation of mouse ES cells 2005, Nature Biotechnology: Volum 23 s. 1542-1550;Yasunaga, Masahiro; Tada, Shinsuke; Torikai-Nishikawa, Satomi; Nakano, Yoko; Okada, Mitsuhiro; Jakt, Lars Martin
2003
An Open Source Client-Server System for the Analysis of Affymetrix Microarray Data 2003, Genome Informatics Series: Volum 14 s. 276-277;Jakt, Lars Martin; Okada, Mitsuhiro; Nishikawa, Shinichi
In Vitro Differentiation of Mouse Embryonic Stem Cells: Hematopoietic and Vascular Cell Types 2003, Methods in Enzymology: Volum 365 s. 59-72;Fraser, Stuart T; Yamashita, Jun; Jakt, Lars Martin; Okada, Mitsuhiro; Ogawa, Minetaro; Nishikawa, Satomi
2002
Auto/Cross-Regulation of Hoxb3 Expression in Posterior Hindbrain and Spinal Cord 2002, Developmental Biology: Volum 252 s. 287-300;Yau, Tai On; Kwan, Chung Tin; Jakt, Lars Martin; Stallwood, Nicole; Cordes, Sabine; Sham, Mai Har
2001
Assessing Clusters and Motifs from Gene Expression Data 2001, Genome Research: Volum 11 s. 112-123;Jakt, Lars Martin; Cao, Liang; Cheah, Kathryn S.E.; Smith, David K.
2019
codeR 2019,;Jakt, Lars Martin
Investigating the community structure of eukaryotic benthic organisms by the extraction and analysis of limited mRNA 2019,;Mailli, Amalia Aikaterini; Jakt, Lars Martin; Reiss, Henning; Moum, Truls Borg
Exploration of an anglerfish genome 2019, Nord universitet:;Dubin, Arseny; Johansen, Steinar Daae; Jakt, Lars Martin
2018
Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic 2018,;Adam, Anne-Catrin; Lie, Kai Kristoffer; Whatmore, Paul; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Nivået av arakidonsyre påvirker genuttrykket og DNA metylering i neste generasjon 2018,;Adam, Anne-Catrin; Lie, Kai Kristoffer; Whatmore, Paul; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Epigenetiske effekter av fiskefôr 2018,;Skjærven, Kaja Helvik; Jakt, Lars Martin; Espe, Marit
Epigenetic and transcriptional effects of optimizing 1-C nutrients in plant based feeds for Atlantic salmon 2018,;Skjærven, Kaja Helvik; Fernandes, Jorge Manuel de Oliveira; Dahl, John Arne; Hamre, Kristin; Jakt, Lars Martin
2017
Genomics & Bioinformatics 2017,;Jakt, Lars Martin
bioinfcourse 2017,;Jakt, Lars Martin
HTS2016_mj 2017,;Jakt, Lars Martin
The problem with sophisticated statistical analyses 2017,;Jakt, Lars Martin
Aquatic Genomics and Bioinformatics 2017,;Jakt, Lars Martin
Bioinformatics and Genomics 2017,;Jakt, Lars Martin
The Mitochondrial Genome of the European Anglerfish Lophius Piscatorius Express Low-Level Substitution Heteroplasmy 2017, Annals of Marine Biology and Research: Volum 4;Dubin, Arseny; Jørgensen, Tor Erik; Jakt, Lars Martin; Moum, Truls Borg; Johansen, Steinar Daae
2016
Genomics & Bioinformatics 2016,;Jakt, Lars Martin
Bioinformatics and Genomics 2016,;Jakt, Lars Martin
Aquatic Genomics and Bioinformatics 2016,;Jakt, Lars Martin
High arachidonic acid level in the feed for zebrafish changes the metabolism and DNA methylation in both parents and offspring 2016,;Adam, Anne-Catrin; Lie, Kai Kristoffer; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
2015
R-SOD 2015,;Jakt, Lars Martin
Genomics & Bioinformatics 2015,;Jakt, Lars Martin
Bioinformatics and Genomics 2015,;Jakt, Lars Martin
dvReader 2015,;Jakt, Lars Martin
eXintegrator 2015,;Jakt, Lars Martin
Cyto-R 2015,;Jakt, Lars Martin
Description and manual for SOD multidimensional scaling 2015,;Jakt, Lars Martin
BbiParser 2015,;Jakt, Lars Martin
megaDotter 2015,;Jakt, Lars Martin
Dietary high arachidonic acid level affects the DNA methylation pattern in zebrafish 2015,;Adam, Anne-Catrin; Lie, Kai Kristoffer; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Changes in metabolic pathways and DNA methylation patterns in zebrafish fed high arachidonic acid levels 2015,;Adam, Anne-Catrin; Lie, Kai Kristoffer; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
2014
2013
Counting transcripts to quantify relationships 2013,;Jakt, Lars Martin
Forcing ES differentiation 2013,;Jakt, Lars Martin
2012
2011
Cellular identities arising during mesoderm differentiation 2011,;Jakt, Lars Martin
Counting transcripts 2011,;Jakt, Lars Martin
Determining cell population composition by counting transcripts 2011,;Jakt, Lars Martin
Determining cell population composition by counting transcripts 2011,;Jakt, Lars Martin
2010
2009
Something about transcription 2009,;Jakt, Lars Martin
2008
Dealing with microarray and other large data sets 2008,;Jakt, Lars Martin
Considering gene expression: lessons from transcriptomes 2008,;Jakt, Lars Martin
Counting RNA for fun and profit 2008,;Jakt, Lars Martin
2006
(mis)understanding stem cell differentiation 2006,;Jakt, Lars Martin
DNA microarray for stem cell research 2006,;Jakt, Lars Martin; Era, Takumi; Nishikawa, Shinichi
2005
Problems and Opportunities of Large Data Sets 2005,;Jakt, Lars Martin
2004
Transcriptomics of embryonic stem cell differentiation 2004,;Jakt, Lars Martin
Distributed analysis of microarray data 2004,;Jakt, Lars Martin
2003
An open source client-server system for the analysis of Affymetrix microarray data 2003,;Jakt, Lars Martin; Okada, Mitsuhiro; Nishikawa, Shinichi
1995
Identification of a potential auto-regulatory site upstream of mouse Hoxb-3 gene 1995,;Jakt, Lars Martin; Sham, Mai Har