Lars Martin Jakt
Forsker
Fakultet for biovitenskap og akvakultur
2022
Exploring the potential of mRNA for taxonomic delineation of marine benthic eukaryotes 2022, Marine Genomics: Volum 62 Mailli, Amalia Aikaterini; Jakt, Lars Martin; Reiss, Henning; Kopp, Martina Elisabeth Luise; Moum, Truls Borg
Intron size minimisation in teleosts 2022, BMC Genomics: Volum 23 Jakt, Lars Martin; Dubin, Arseny; Johansen, Steinar Daae
2019
Exploration of an anglerfish genome 2019, Nord universitet: Dubin, Arseny; Johansen, Steinar Daae; Jakt, Lars Martin
The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019, BMC Research Notes: Volum 12 Dubin, Arseny; Jørgensen, Tor Erik; Jakt, Lars Martin; Johansen, Steinar Daae
Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic acid. 2019, PLOS ONE: Volum 14 Adam, Anne-Catrin; Lie, Kai Kristoffer; Whatmore, Paul; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Complete loss of the MHC II pathway in an anglerfish, Lophius piscatorius 2019, Biology Letters: Volum 15 s. 1-6 Dubin, Arseny; Jørgensen, Tor Erik; Moum, Truls Borg; Johansen, Steinar Daae; Jakt, Lars Martin
2018
Parental micronutrient deficiency distorts liver DNA methylation and expression of lipid genes associated with a fatty-liver-like phenotype in offspring 2018, Scientific Reports: Volum 8 Skjærven, Kaja Helvik; Jakt, Lars Martin; Fernandes, Jorge Manuel de Oliveira; Dahl, John Arne; Adam, Anne-Catrin; Klughammer, Johanna
Early hematopoietic and vascular development in the chick 2018, International Journal of Developmental Biology: Volum 62 s. 137-144 Nagai, Hiroki; Shin, Masahiro; Weng, Wei; Nakazawa, Fumie; Jakt, Lars Martin; Alev, Cantas
A mitochondrial long noncoding RNA in atlantic cod harbors complex heteroplasmic tandem repeat motifs 2018, Mitochondrial DNA. Part A, DNA Mapping, Sequencing, and Analysis: s. 1-6 Jørgensen, Tor Erik; Karlsen, Bård Ove; Emblem, Åse; Jakt, Lars Martin; Nordeide, Jarle Tryti; Moum, Truls Borg
Mitochondrial genome variation of Atlantic cod 2018, BMC Research Notes: Volum 11:397 s. 1-7 Jørgensen, Tor Erik; Karlsen, Bård Ove; Emblem, Åse; Breines, Ragna; Andreassen, morten; Rounge, Trine Ballestad
2016
Parental vitamin deficiency affects the embryonic gene expression of immune-, lipid transport-and apolipoprotein genes 2016, Scientific Reports: Volum 6 Skjærven, Kaja Helvik; Jakt, Lars Martin; Dahl, John Arne; Espe, Marit; Aanes, Håvard; Hamre, Kristin
2014
Longitudinal Analysis of DNA Methylation in CD34+ Hematopoietic Progenitors in Myelodysplastic Syndrome 2014, Stem Cells Translational Medicine: Volum 3 s. 1188-1198 Wong, Yan-fung; Micklem, Chris N.; Taguchi, Masataka; Itonaga, Hidehiro; Sawayama, Yasushi; Imanishi, Daisuke
2013
Epigenetic regulation of the neuroblastoma genes, Arid3b and Mycn 2013, Oncogene: Volum 32 s. 2640-2648 Kobayashi, K; Jakt, Lars Martin; Nishikawa, Shinichi
A competitive protein interaction network buffers Oct4-mediated differentiation to promote pluripotency in embryonic stem cells 2013, Molecular Systems Biology: Volum 9 s. 694 Descalzo, Silvia Munoz; Rue, Pau; Faunes, Fernando; Hayward, Penelope; Jakt, Lars Martin; Balayo, Tina
A continuum of transcriptional identities visualized by combinatorial fluorescent in situ hybridization 2013, Development: Volum 140 s. 216-225 Jakt, Lars Martin; Moriwaki, Satoko; Nishikawa, Shinichi
DNA Methylation Restricts Lineage-specific Functions of Transcription Factor Gata4 during Embryonic Stem Cell Differentiation 2013, PLoS Genetics: Volum 9 Oda, Masaaki; Kumaki, Yuichi; Shigeta, Masaki; Jakt, Lars Martin; Matsuoka, Chisa; Yamagiwa, Akiko
Prolonged Treatment with DNMT Inhibitors Induces Distinct Effects in Promoters and Gene-Bodies 2013, PLOS ONE: Volum 8 Wong, Yan-fung; Jakt, Lars Martin; Nishikawa, Shinichi
2012
Arhgef15 Promotes Retinal Angiogenesis by Mediating VEGF-Induced Cdc42 Activation and Potentiating RhoJ Inactivation in Endothelial Cells 2012, PLOS ONE: Volum 7 Kusuhara, Sentaro; Fukushima, Yoko; Fukuhara, Shigetomo; Jakt, Lars Martin; Okada, Mitsuhiro; Shimizu, Yuri
2011
Identification of region-specific genes in the early chicken endoderm 2011, Gene Expression Patterns: Volum 11 s. 171-180 Kimura, Wataru; Alev, Cantas; Sheng, Guojun; Jakt, Lars Martin; Yasugi, Sadao; Fukuda, Kimiko
Yolk sac endoderm is the major source of serum proteins and lipids and is involved in the regulation of vascular integrity in early chick development 2011, Developmental Dynamics: Volum 240 s. 2002-2010 Nakazawa, Fumie; Alev, Cantas; Jakt, Lars Martin; Sheng, Guojun
Etv2/ER71 induces vascular mesoderm from Flk1+PDGFRα+ primitive mesoderm 2011, Blood: Volum 118 s. 6975-6986 Kataoka, Hiroshi; Hayashi, Misato; Nakagawa, Reiko; Tanaka, Yosuke; Izumi, Naoki; Nishikawa, Satomi
Intrinsic transition of embryonic stem-cell differentiation into neural progenitors 2011, Nature: Volum 470 s. 503-509 Kamiya, Daisuke; Banno, Satoe; Sasai, Noriaki; Ohgushi, Masatoshi; Inomata, Hidehiko; Watanabe, Kiichi
2010
Secreted Frizzled Related Protein 4 Reduces Fibrosis Scar Size and Ameliorates Cardiac Function After Ischemic Injury 2010, Tissue Engineering Part A: Volum 16 s. 3329-3341 Matsushima, Kentaro; Suyama, Takashi; Takenaka, Chiemi; Nishishita, Naoki; Ikeda, Keiko; Ikada, Yoshito
Effective generation of iPS cells from CD34+ cord blood cells by inhibition of p53 2010, Experimental Hematology: Volum 38 s. 154-162 Takenaka, Chiemi; Nishishita, Naoki; Takada, Nozomi; Jakt, Lars Martin; Kawamata, Shin
Transcriptomic landscape of the primitive streak 2010, Development: Volum 137 s. 2863-2874 Alev, Cantas; Wu, Yuping; Kasukawa, Takeya; Jakt, Lars Martin; Ueda, Hiroki R.; Sheng, Guojun
2009
PBRL, a putative peripheral benzodiazepine receptor, in primitive erythropoiesis 2009, Gene Expression Patterns: Volum 9 s. 114-121 Nakazawa, Fumie; Alev, Cantas; Shin, Masahiro; Nakaya, Yukiko; Jakt, Lars Martin; Sheng, Guojun
Necdin restricts proliferation of hematopoietic stem cells during hematopoietic regeneration 2009, Blood: Volum 114 s. 4383-4392 Kubota, Yasushi; Osawa, Masatake; Jakt, Lars Martin; Yoshikawa, Kazuaki; Nishikawa, Shiniche
The novel protein kinase Vlk is essential for stromal function of mesenchymal cells 2009, Development: Volum 136 s. 2069-2079 Kinoshita, Masaki; Era, Takumi; Jakt, Lars Martin; Nishikawa, Shinichi
2008
BetaA, the major beta globin in definitive red blood cells, is present from the onset of primitive erythropoiesis in chicken 2008, Developmental Dynamics: Volum 237 s. 1193-1197 Alev, Cantas; Mclntyre, Brendan; Nagai, Hiroki; Shin, Masahiro; Shinmyozu, Kaori; Jakt, Lars Martin
Expression profiling of circulating non-red blood cells in embryonic blood 2008, BMC Developmental Biology: Volum 8 s. 21 Mclntyre, Brendan; Alev, Cantas; Tarui, Hiroshi; Jakt, Lars Martin; Sheng, Guojun
DNA chip databases, omics, and gene fishing: Commentary 2008, Cancer Science: Volum 99 s. 829-835 Jakt, Lars Martin; Nishikawa, Shinichi
2007
Isolation of cardiac cells from E8.5 yolk sac by ALCAM (CD166) expression 2007, Mechanisms of Development: Volum 124 s. 830-839 Murakami, Yoshinobu; Hirata, Hirokazu; Miyamoto, Yoshiaki; Nagahashi, Ayako; Sawa, Yoshiki; Jakt, Lars Martin
Array-based functional screening for genes that regulate vascular endothelial differentiation of Flk1-positive progenitors derived from embryonic stem cells 2007, Biochimica et Biophysica Acta: Volum 1770 s. 1085-1097 Yamauchi, Fumio; Okada, Mitsuhiro; Kato, Koichi; Jakt, Lars Martin; Iwata, Hiroo
Embryonic stem-cell culture as a tool for developmental cell biology 2007, Nature reviews. Molecular cell biology: Volum 8 s. 502-507 Nishikawa, Shinichi; Jakt, Lars Martin; Era, Takumi
2006
ARID3B Induces Malignant Transformation of Mouse Embryonic Fibroblasts and Is Strongly Associated with Malignant Neuroblastoma 2006, Cancer Research: Volum 66 s. 8331-8336 Kobayashi, Kenichiro; Era, Takumi; Takebe, Atsushi; Jakt, Lars Martin; Nishikawa, Shinichi
ALCAM (CD166) Is a Surface Marker for Early Murine Cardiomyocytes 2006, Cells Tissues Organs: Volum 184 s. 172-180 Hirata, Hirokazu; Murakami, Yoshinobu; Miyamoto, Yoshiaki; Tosaka, M.; Inoue, K.; Nagahashi, A.
Microarray analysis of PDGFRα+ populations in ES cell differentiation culture identifies genes involved in differentiation of mesoderm and mesenchyme including ARID3b that is essential for development of embryonic mesenchymal cells 2006, Developmental Biology: Volum 293 s. 25-37 Takebe, Atsushi; Era, Takumi; Okada, Mitsuhiro; Jakt, Lars Martin; Kuroda, Yoshikazu; Nishikawa, Shinichi
In Vitro Modeling of Paraxial and Lateral Mesoderm Differentiation Reveals Early Reversibility 2006, Stem Cells: Volum 24 s. 575-586 Sakurai, Hidetoshi; Era, Takumi; Jakt, Lars Martin; Okada, Matsuhiro; Nakai, Shigeru; Nishikawa, Satomi
Equivalency of Nuclear Transfer‐Derived Embryonic Stem Cells to Those Derived from Fertilized Mouse Blastocysts 2006, Stem Cells: Volum 24 s. 2023-2033 Wakayama, Sayaka; Jakt, Lars Martin; Suzuki, Masako; Araki, Ryoko; Hikichi, Takufusa; Kishigami, Satoshi
2005
Induction and monitoring of definitive and visceral endoderm differentiation of mouse ES cells 2005, Nature Biotechnology: Volum 23 s. 1542-1550 Yasunaga, Masahiro; Tada, Shinsuke; Torikai-Nishikawa, Satomi; Nakano, Yoko; Okada, Mitsuhiro; Jakt, Lars Martin
2003
An Open Source Client-Server System for the Analysis of Affymetrix Microarray Data 2003, Genome Informatics Series: Volum 14 s. 276-277 Jakt, Lars Martin; Okada, Mitsuhiro; Nishikawa, Shinichi
In Vitro Differentiation of Mouse Embryonic Stem Cells: Hematopoietic and Vascular Cell Types 2003, Methods in Enzymology: Volum 365 s. 59-72 Fraser, Stuart T; Yamashita, Jun; Jakt, Lars Martin; Okada, Mitsuhiro; Ogawa, Minetaro; Nishikawa, Satomi
2002
Auto/Cross-Regulation of Hoxb3 Expression in Posterior Hindbrain and Spinal Cord 2002, Developmental Biology: Volum 252 s. 287-300 Yau, Tai On; Kwan, Chung Tin; Jakt, Lars Martin; Stallwood, Nicole; Cordes, Sabine; Sham, Mai Har
2001
Assessing Clusters and Motifs from Gene Expression Data 2001, Genome Research: Volum 11 s. 112-123 Jakt, Lars Martin; Cao, Liang; Cheah, Kathryn S.E.; Smith, David K.
2019
codeR 2019, Jakt, Lars Martin
Investigating the community structure of eukaryotic benthic organisms by the extraction and analysis of limited mRNA 2019, Mailli, Amalia Aikaterini; Jakt, Lars Martin; Reiss, Henning; Moum, Truls Borg
2018
Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic 2018, Adam, Anne-Catrin; Lie, Kai Kristoffer; Whatmore, Paul; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Nivået av arakidonsyre påvirker genuttrykket og DNA metylering i neste generasjon 2018, Adam, Anne-Catrin; Lie, Kai Kristoffer; Whatmore, Paul; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Epigenetiske effekter av fiskefôr 2018, Skjærven, Kaja Helvik; Jakt, Lars Martin; Espe, Marit
Epigenetic and transcriptional effects of optimizing 1-C nutrients in plant based feeds for Atlantic salmon 2018, Skjærven, Kaja Helvik; Fernandes, Jorge Manuel de Oliveira; Dahl, John Arne; Hamre, Kristin; Jakt, Lars Martin
2017
Genomics & Bioinformatics 2017, Jakt, Lars Martin
bioinfcourse 2017, Jakt, Lars Martin
HTS2016_mj 2017, Jakt, Lars Martin
The problem with sophisticated statistical analyses 2017, Jakt, Lars Martin
Aquatic Genomics and Bioinformatics 2017, Jakt, Lars Martin
Bioinformatics and Genomics 2017, Jakt, Lars Martin
The Mitochondrial Genome of the European Anglerfish Lophius Piscatorius Express Low-Level Substitution Heteroplasmy 2017, Annals of Marine Biology and Research: Volum 4 Dubin, Arseny; Jørgensen, Tor Erik; Jakt, Lars Martin; Moum, Truls Borg; Johansen, Steinar Daae
2016
Genomics & Bioinformatics 2016, Jakt, Lars Martin
Bioinformatics and Genomics 2016, Jakt, Lars Martin
Aquatic Genomics and Bioinformatics 2016, Jakt, Lars Martin
High arachidonic acid level in the feed for zebrafish changes the metabolism and DNA methylation in both parents and offspring 2016, Adam, Anne-Catrin; Lie, Kai Kristoffer; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
2015
R-SOD 2015, Jakt, Lars Martin
Genomics & Bioinformatics 2015, Jakt, Lars Martin
Bioinformatics and Genomics 2015, Jakt, Lars Martin
dvReader 2015, Jakt, Lars Martin
eXintegrator 2015, Jakt, Lars Martin
Cyto-R 2015, Jakt, Lars Martin
Description and manual for SOD multidimensional scaling 2015, Jakt, Lars Martin
BbiParser 2015, Jakt, Lars Martin
megaDotter 2015, Jakt, Lars Martin
Dietary high arachidonic acid level affects the DNA methylation pattern in zebrafish 2015, Adam, Anne-Catrin; Lie, Kai Kristoffer; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
Changes in metabolic pathways and DNA methylation patterns in zebrafish fed high arachidonic acid levels 2015, Adam, Anne-Catrin; Lie, Kai Kristoffer; Jakt, Lars Martin; Moren, Mari; Skjærven, Kaja Helvik
2014
2013
Counting transcripts to quantify relationships 2013, Jakt, Lars Martin
Forcing ES differentiation 2013, Jakt, Lars Martin
2012
2011
Cellular identities arising during mesoderm differentiation 2011, Jakt, Lars Martin
Counting transcripts 2011, Jakt, Lars Martin
Determining cell population composition by counting transcripts 2011, Jakt, Lars Martin
Determining cell population composition by counting transcripts 2011, Jakt, Lars Martin
2010
2009
Something about transcription 2009, Jakt, Lars Martin
2008
Dealing with microarray and other large data sets 2008, Jakt, Lars Martin
Considering gene expression: lessons from transcriptomes 2008, Jakt, Lars Martin
Counting RNA for fun and profit 2008, Jakt, Lars Martin
2006
(mis)understanding stem cell differentiation 2006, Jakt, Lars Martin
DNA microarray for stem cell research 2006, Jakt, Lars Martin; Era, Takumi; Nishikawa, Shinichi
2005
Problems and Opportunities of Large Data Sets 2005, Jakt, Lars Martin
2004
Transcriptomics of embryonic stem cell differentiation 2004, Jakt, Lars Martin
Distributed analysis of microarray data 2004, Jakt, Lars Martin
2003
An open source client-server system for the analysis of Affymetrix microarray data 2003, Jakt, Lars Martin; Okada, Mitsuhiro; Nishikawa, Shinichi
1995
Identification of a potential auto-regulatory site upstream of mouse Hoxb-3 gene 1995, Jakt, Lars Martin; Sham, Mai Har